Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AL161713.1-201ENST00000555538 145 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC136624.4-201ENST00000573044 370 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 MIR4666A-201ENST00000580160 79 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC090312.2-201ENST00000582687 378 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCNKAP51800 NTAN1P1-201ENST00000603150 646 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 DUXAP3-201ENST00000603616 594 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC113403.1-201ENST00000604910 193 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AP002360.3-201ENST00000607673 710 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC099676.1-201ENST00000608886 657 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AP000255.1-201ENST00000610276 676 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 MIR6798-201ENST00000612887 67 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC083809.1-201ENST00000615051 472 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC023509.5-201ENST00000617434 807 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC018926.3-201ENST00000618841 406 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC067852.7-201ENST00000623270 535 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 MTND4P26-201ENST00000415971 1359 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCNKAP51800 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AP005901.5-201ENST00000545779 1796 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLCNKAP51800 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CLCNKAP51800 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CLCNKAP51800 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.34□□□□□ -1.72
CLCNKAP51800 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLCNKAP51800 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL133412.1-201ENST00000380194 2992 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 USP9YP4-201ENST00000424401 1745 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLCNKAP51800 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC008033.1-201ENST00000216407 1162 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 RNA5SP151-201ENST00000365632 117 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 OR52E6-202ENST00000379946 954 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 RNU6-83P-201ENST00000384568 112 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 RNY3P9-201ENST00000384727 106 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 SFR1P1-201ENST00000403720 688 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL139095.3-201ENST00000419672 1203 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 EIF4EP1-201ENST00000422311 642 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCNKAP51800 MTCO1P3-201ENST00000429327 192 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCNKAP51800 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 PHBP16-201ENST00000446318 950 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC007327.1-201ENST00000447461 264 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCNKAP51800 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCNKAP51800 RN7SL817P-201ENST00000480777 288 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC108022.1-201ENST00000493466 478 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCNKAP51800 RN7SKP283-201ENST00000517197 270 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC115085.1-201ENST00000588924 229 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 TUSC7.1-201ENST00000610969 165 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC107075.1-201ENST00000613695 314 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC105227.2-201ENST00000615075 605 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AC006338.2-201ENST00000616864 791 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC079416.3-201ENST00000624479 549 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.33□□□□□ -1.72
CLCNKAP51800 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC026951.1-201ENST00000559530 2459 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCNKAP51800 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CLCNKAP51800 AC025125.1-201ENST00000624743 1922 ntBASIC4.33□□□□□ -1.72
CLCNKAP51800 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AC119744.1-201ENST00000454746 1715 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms