Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
MRE11P49959 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MRE11P49959 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.66□□□□□ -1.5
MRE11P49959 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 SNORA73.1-201ENST00000363107 205 ntBASIC5.66□□□□□ -1.5
MRE11P49959 Y_RNA.516-201ENST00000384541 124 ntBASIC5.66□□□□□ -1.5
MRE11P49959 MT-TP-201ENST00000387461 68 ntBASIC5.66□□□□□ -1.5
MRE11P49959 TAF9BP1-201ENST00000396646 746 ntBASIC5.66□□□□□ -1.5
MRE11P49959 GLULP6-201ENST00000399502 913 ntBASIC5.66□□□□□ -1.5
MRE11P49959 LAP3P1-201ENST00000403648 294 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AL136131.1-201ENST00000406079 803 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AP000357.1-201ENST00000409926 1165 ntBASIC5.66□□□□□ -1.5
MRE11P49959 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 AC007435.1-201ENST00000421086 415 ntBASIC5.66□□□□□ -1.5
MRE11P49959 GTF2IP23-201ENST00000423746 351 ntBASIC5.66□□□□□ -1.5
MRE11P49959 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC079776.3-201ENST00000450665 370 ntBASIC5.66□□□□□ -1.5
MRE11P49959 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.66□□□□□ -1.5
MRE11P49959 AC010469.1-201ENST00000463864 576 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC147055.4-201ENST00000504399 745 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC004069.2-201ENST00000505438 1114 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC109458.1-201ENST00000508858 316 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
MRE11P49959 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 AC106038.2-201ENST00000520706 568 ntBASIC5.66□□□□□ -1.5
MRE11P49959 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.66□□□□□ -1.5
MRE11P49959 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
MRE11P49959 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.66□□□□□ -1.5
MRE11P49959 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.66□□□□□ -1.5
MRE11P49959 AC009117.1-201ENST00000563948 554 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AL512347.1-201ENST00000566420 503 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC067959.1-201ENST00000604334 379 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AP001596.2-201ENST00000608410 312 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC000068.2-201ENST00000608816 460 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC015813.4-201ENST00000610469 179 ntBASIC5.66□□□□□ -1.5
MRE11P49959 AC007342.8-201ENST00000623278 678 ntBASIC5.66□□□□□ -1.5
MRE11P49959 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 AL122126.1-201ENST00000546905 1318 ntBASIC5.66□□□□□ -1.5
MRE11P49959 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
MRE11P49959 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 AC005539.1-201ENST00000443768 1479 ntBASIC5.65□□□□□ -1.5
MRE11P49959 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.65□□□□□ -1.5
MRE11P49959 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 TLK1P1-201ENST00000456760 2440 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
MRE11P49959 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.65□□□□□ -1.5
MRE11P49959 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.65□□□□□ -1.5
MRE11P49959 AC107027.3-201ENST00000565095 3473 ntBASIC5.65□□□□□ -1.5
MRE11P49959 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
MRE11P49959 RNA5SP335-201ENST00000363817 110 ntBASIC5.65□□□□□ -1.5
MRE11P49959 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MRE11P49959 RNU6-244P-201ENST00000391028 104 ntBASIC5.65□□□□□ -1.5
MRE11P49959 SNORA57.1-201ENST00000391227 145 ntBASIC5.65□□□□□ -1.5
MRE11P49959 DEFB108C-201ENST00000400154 252 ntBASIC5.65□□□□□ -1.5
MRE11P49959 OR4K12P-201ENST00000406538 961 ntBASIC5.65□□□□□ -1.5
MRE11P49959 USP9YP33-201ENST00000412220 421 ntBASIC5.65□□□□□ -1.5
MRE11P49959 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AL591848.1-201ENST00000413092 322 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.65□□□□□ -1.5
MRE11P49959 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.65□□□□□ -1.5
MRE11P49959 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 OR6K4P-201ENST00000423179 955 ntBASIC5.65□□□□□ -1.5
MRE11P49959 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC092162.1-201ENST00000432828 434 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 NCOR1P1-202ENST00000486162 291 ntBASIC5.65□□□□□ -1.5
MRE11P49959 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 AC079395.1-201ENST00000510981 262 ntBASIC5.65□□□□□ -1.5
MRE11P49959 HMGB3P13-201ENST00000511263 607 ntBASIC5.65□□□□□ -1.5
MRE11P49959 MYL12AP1-201ENST00000518490 515 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC083923.1-201ENST00000523708 376 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.65□□□□□ -1.5
MRE11P49959 AP006289.1-201ENST00000538089 277 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AP002373.2-201ENST00000541631 1060 ntBASIC5.65□□□□□ -1.5
MRE11P49959 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.65□□□□□ -1.5
MRE11P49959 ROCK1P1-201ENST00000573767 549 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.65□□□□□ -1.5
MRE11P49959 AC087683.1-201ENST00000591187 441 ntBASIC5.65□□□□□ -1.5
MRE11P49959 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms