Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.46□□□□□ -1.86
HTTP42858 AC015813.6-201ENST00000624409 5808 ntBASIC3.46□□□□□ -1.86
HTTP42858 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.46□□□□□ -1.86
HTTP42858 AL360182.1-201ENST00000397433 468 ntBASIC3.46□□□□□ -1.86
HTTP42858 AL356057.1-202ENST00000402263 756 ntBASIC3.46□□□□□ -1.86
HTTP42858 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.46□□□□□ -1.86
HTTP42858 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.46□□□□□ -1.86
HTTP42858 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.46□□□□□ -1.86
HTTP42858 IFNA11P-201ENST00000446352 526 ntBASIC3.46□□□□□ -1.86
HTTP42858 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.46□□□□□ -1.86
HTTP42858 AC009097.3-201ENST00000563557 1018 ntBASIC3.46□□□□□ -1.86
HTTP42858 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.46□□□□□ -1.86
HTTP42858 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC3.46□□□□□ -1.86
HTTP42858 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.46□□□□□ -1.86
HTTP42858 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 HLFP1-201ENST00000402375 499 ntBASIC3.46□□□□□ -1.86
HTTP42858 RN7SKP56-201ENST00000410513 331 ntBASIC3.46□□□□□ -1.86
HTTP42858 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.46□□□□□ -1.86
HTTP42858 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.46□□□□□ -1.86
HTTP42858 IGKV3-31-201ENST00000523109 329 ntBASIC3.46□□□□□ -1.86
HTTP42858 AC007336.1-201ENST00000576365 3828 ntBASIC3.46□□□□□ -1.86
HTTP42858 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HTTP42858 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
HTTP42858 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.45□□□□□ -1.86
HTTP42858 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 AC004552.1-201ENST00000419089 348 ntBASIC3.45□□□□□ -1.86
HTTP42858 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 RPS24P13-201ENST00000442520 397 ntBASIC3.45□□□□□ -1.86
HTTP42858 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 SNRPCP3-201ENST00000474888 476 ntBASIC3.45□□□□□ -1.86
HTTP42858 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.45□□□□□ -1.86
HTTP42858 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.45□□□□□ -1.86
HTTP42858 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.45□□□□□ -1.86
HTTP42858 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 AL645937.1-202ENST00000421799 937 ntBASIC3.45□□□□□ -1.86
HTTP42858 AC104687.1-201ENST00000485829 412 ntBASIC3.45□□□□□ -1.86
HTTP42858 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.45□□□□□ -1.86
HTTP42858 AC124856.1-201ENST00000600819 896 ntBASIC3.45□□□□□ -1.86
HTTP42858 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HTTP42858 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HTTP42858 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.45□□□□□ -1.86
HTTP42858 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.44□□□□□ -1.86
HTTP42858 SNORD109B-201ENST00000458961 67 ntBASIC3.44□□□□□ -1.86
HTTP42858 SNORD109A-201ENST00000459128 67 ntBASIC3.44□□□□□ -1.86
HTTP42858 RNA5SP103-201ENST00000459503 118 ntBASIC3.44□□□□□ -1.86
HTTP42858 RN7SKP116-201ENST00000516902 319 ntBASIC3.44□□□□□ -1.86
HTTP42858 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.44□□□□□ -1.86
HTTP42858 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.44□□□□□ -1.86
HTTP42858 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC3.44□□□□□ -1.86
HTTP42858 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.44□□□□□ -1.86
HTTP42858 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.44□□□□□ -1.86
HTTP42858 AC011266.1-201ENST00000624119 3569 ntBASIC3.44□□□□□ -1.86
HTTP42858 RPL21P109-201ENST00000422213 475 ntBASIC3.44□□□□□ -1.86
HTTP42858 MRPS21P9-201ENST00000571150 257 ntBASIC3.44□□□□□ -1.86
HTTP42858 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HTTP42858 RNU6-851P-201ENST00000384565 107 ntBASIC3.44□□□□□ -1.86
HTTP42858 RAP1BP1-201ENST00000412709 553 ntBASIC3.44□□□□□ -1.86
HTTP42858 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.44□□□□□ -1.86
HTTP42858 EEF1B2P7-201ENST00000451177 676 ntBASIC3.44□□□□□ -1.86
HTTP42858 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.44□□□□□ -1.86
HTTP42858 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.44□□□□□ -1.86
HTTP42858 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.44□□□□□ -1.86
HTTP42858 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.44□□□□□ -1.86
HTTP42858 AL049874.4-201ENST00000557593 255 ntBASIC3.44□□□□□ -1.86
HTTP42858 AC096947.1-201ENST00000603233 470 ntBASIC3.44□□□□□ -1.86
HTTP42858 AC098826.3-201ENST00000603823 466 ntBASIC3.44□□□□□ -1.86
HTTP42858 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
HTTP42858 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HTTP42858 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.43□□□□□ -1.86
HTTP42858 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HTTP42858 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 IFNNP1-201ENST00000429219 553 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms