Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.09□□□□□ -1.75
APOBEC1P41238 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
APOBEC1P41238 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
APOBEC1P41238 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
APOBEC1P41238 AC139769.1-204ENST00000472297 1931 ntBASIC4.09□□□□□ -1.76
APOBEC1P41238 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
APOBEC1P41238 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
APOBEC1P41238 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC103591.2-201ENST00000265259 766 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
APOBEC1P41238 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
APOBEC1P41238 IL6STP1-201ENST00000346911 1020 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 Y_RNA.25-201ENST00000362528 102 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 RNU1-85P-201ENST00000364127 164 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 Y_RNA.408-201ENST00000383987 102 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 RNU6-1293P-201ENST00000384077 107 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 RNU5A-2P-201ENST00000384337 116 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 MIR195-201ENST00000385194 87 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 SNORD96B-201ENST00000386148 79 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 RPS3AP23-201ENST00000401762 784 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 UQCRBP1-201ENST00000421129 336 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC234779.1-201ENST00000425910 285 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.08□□□□□ -1.76
APOBEC1P41238 MTCYBP34-201ENST00000439552 670 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 ARL4AP3-201ENST00000441452 574 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 RPL12P26-201ENST00000452430 487 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AP000893.1-201ENST00000474462 794 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.08□□□□□ -1.76
APOBEC1P41238 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC118465.1-201ENST00000513820 1271 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 RNA5SP497-201ENST00000516081 97 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC105185.1-201ENST00000518705 535 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC007834.2-201ENST00000536310 343 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 TRAV15-201ENST00000556680 249 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.08□□□□□ -1.76
APOBEC1P41238 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC002400.1-201ENST00000569310 726 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 RN7SL176P-201ENST00000580352 264 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC087283.1-201ENST00000604029 1074 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AL133507.1-201ENST00000605269 557 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC116651.1-201ENST00000609724 556 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 RNU6-156P-201ENST00000621869 107 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOBEC1P41238 AC006065.6-201ENST00000625201 545 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 AC012618.3-205ENST00000637896 1496 ntBASIC4.08□□□□□ -1.76
APOBEC1P41238 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
APOBEC1P41238 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.08□□□□□ -1.76
APOBEC1P41238 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
APOBEC1P41238 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
APOBEC1P41238 Z95327.2-201ENST00000414579 1873 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.07□□□□□ -1.76
APOBEC1P41238 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
APOBEC1P41238 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
APOBEC1P41238 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
APOBEC1P41238 FAM3C2-201ENST00000312214 681 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 RNU6-621P-201ENST00000364752 109 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 RNU1-63P-201ENST00000383902 164 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 RSL24D1P4-201ENST00000400938 484 ntBASIC4.07□□□□□ -1.76
APOBEC1P41238 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOBEC1P41238 AC119751.6-201ENST00000416712 186 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms