Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP002404.1-201ENST00000532005 451 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
COL4A5P29400 MIR4319-201ENST00000577285 85 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.85□□□□□ -1.79
COL4A5P29400 AC006363.1-201ENST00000603806 463 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 AC245100.7-201ENST00000609678 442 ntBASIC3.85□□□□□ -1.79
COL4A5P29400 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A5P29400 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.85□□□□□ -1.79
COL4A5P29400 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL4A5P29400 AC073325.2-201ENST00000339545 159 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL4A5P29400 XGY1-201ENST00000381172 446 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 AC004552.1-201ENST00000419089 348 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.84□□□□□ -1.79
COL4A5P29400 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.84□□□□□ -1.79
COL4A5P29400 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC069540.1-201ENST00000446320 988 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.84□□□□□ -1.79
COL4A5P29400 CENPBD1P1-201ENST00000464061 469 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 RN7SL432P-201ENST00000484057 298 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A5P29400 RN7SKP116-201ENST00000516902 319 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 FTH1P11-201ENST00000517577 551 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 VN1R90P-201ENST00000595717 726 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.84□□□□□ -1.79
COL4A5P29400 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
COL4A5P29400 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A5P29400 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
COL4A5P29400 AC092435.3-201ENST00000565538 3654 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 FTLP19-201ENST00000433300 394 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 AC008264.1-201ENST00000447612 367 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 RPL7P59-201ENST00000447700 943 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL4A5P29400 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 AL139395.1-201ENST00000603662 160 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 PRELID3BP8-201ENST00000604148 295 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 AL049844.2-201ENST00000604280 628 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 AC015849.2-201ENST00000605738 409 ntBASIC3.84□□□□□ -1.8
COL4A5P29400 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL4A5P29400 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
COL4A5P29400 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL4A5P29400 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.83□□□□□ -1.8
COL4A5P29400 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A5P29400 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A5P29400 RN7SKP220-201ENST00000410611 288 ntBASIC3.83□□□□□ -1.8
COL4A5P29400 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.83□□□□□ -1.8
COL4A5P29400 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.83□□□□□ -1.8
COL4A5P29400 AC005229.2-201ENST00000456995 399 ntBASIC3.83□□□□□ -1.8
COL4A5P29400 RPL31P50-201ENST00000471002 296 ntBASIC3.83□□□□□ -1.8
COL4A5P29400 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.83□□□□□ -1.8
COL4A5P29400 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 BNIP3P38-201ENST00000601117 544 ntBASIC3.83□□□□□ -1.8
COL4A5P29400 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A5P29400 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
COL4A5P29400 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
COL4A5P29400 RIOK3P1-201ENST00000418778 1528 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 AC090971.4-201ENST00000560291 1800 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A5P29400 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A5P29400 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL4A5P29400 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A5P29400 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 AL121576.1-201ENST00000556055 276 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 AC106785.3-201ENST00000564064 847 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A5P29400 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A5P29400 ATP1B3P1-201ENST00000605365 821 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A5P29400 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A5P29400 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A5P29400 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A5P29400 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A5P29400 AC087190.4-201ENST00000574616 8334 ntBASIC3.82□□□□□ -1.8
COL4A5P29400 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A5P29400 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.81□□□□□ -1.8
COL4A5P29400 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.81□□□□□ -1.8
COL4A5P29400 GNG5P5-201ENST00000420444 220 ntBASIC3.81□□□□□ -1.8
COL4A5P29400 NUP35P1-201ENST00000422734 947 ntBASIC3.81□□□□□ -1.8
COL4A5P29400 RPSAP41-201ENST00000439695 860 ntBASIC3.81□□□□□ -1.8
COL4A5P29400 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A5P29400 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A5P29400 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.81□□□□□ -1.8
COL4A5P29400 RPL23AP73-201ENST00000492507 471 ntBASIC3.81□□□□□ -1.8
COL4A5P29400 AL035404.1-201ENST00000497982 568 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms