Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP003497.1-201ENST00000528472 562 ntBASIC6.63□□□□□ -1.35
RFX1P22670 OR4R1P-201ENST00000529879 463 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AC079075.1-201ENST00000559543 878 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AL157700.1-201ENST00000561973 1432 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AC060771.1-201ENST00000582031 164 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AL512782.1-201ENST00000603093 364 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AC115621.1-201ENST00000604653 858 ntBASIC6.63□□□□□ -1.35
RFX1P22670 Z84480.1-201ENST00000605131 311 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 AL442067.2-201ENST00000614033 363 ntBASIC6.63□□□□□ -1.35
RFX1P22670 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RFX1P22670 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RFX1P22670 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.62□□□□□ -1.35
RFX1P22670 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.62□□□□□ -1.35
RFX1P22670 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RFX1P22670 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 SNORD81.2-201ENST00000365153 76 ntBASIC6.62□□□□□ -1.35
RFX1P22670 SNORD82-201ENST00000365530 70 ntBASIC6.62□□□□□ -1.35
RFX1P22670 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 RNU6-606P-201ENST00000384721 111 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AL354719.1-201ENST00000406535 843 ntBASIC6.62□□□□□ -1.35
RFX1P22670 FAT1P1-201ENST00000406588 507 ntBASIC6.62□□□□□ -1.35
RFX1P22670 RNU6-1068P-201ENST00000410958 103 ntBASIC6.62□□□□□ -1.35
RFX1P22670 RPL12P9-201ENST00000412942 488 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 PDCL2P1-201ENST00000419302 352 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC092832.1-201ENST00000422934 400 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.62□□□□□ -1.35
RFX1P22670 RPS15AP9-201ENST00000439856 381 ntBASIC6.62□□□□□ -1.35
RFX1P22670 H3F3BP1-201ENST00000440551 403 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC104308.1-201ENST00000454621 333 ntBASIC6.62□□□□□ -1.35
RFX1P22670 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC022034.3-201ENST00000471393 478 ntBASIC6.62□□□□□ -1.35
RFX1P22670 RN7SL629P-201ENST00000489622 285 ntBASIC6.62□□□□□ -1.35
RFX1P22670 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 SCARNA15.1-201ENST00000516384 125 ntBASIC6.62□□□□□ -1.35
RFX1P22670 Y_RNA.710-201ENST00000516975 110 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.62□□□□□ -1.35
RFX1P22670 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.62□□□□□ -1.35
RFX1P22670 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 AC098848.2-201ENST00000588023 330 ntBASIC6.62□□□□□ -1.35
RFX1P22670 VN1R80P-201ENST00000597126 338 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC141002.1-201ENST00000607025 279 ntBASIC6.62□□□□□ -1.35
RFX1P22670 AC010424.2-201ENST00000607594 443 ntBASIC6.62□□□□□ -1.35
RFX1P22670 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.62□□□□□ -1.35
RFX1P22670 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 AL049767.1-202ENST00000637826 242 ntBASIC6.62□□□□□ -1.35
RFX1P22670 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.62□□□□□ -1.35
RFX1P22670 AC015813.6-201ENST00000624409 5808 ntBASIC6.62□□□□□ -1.35
RFX1P22670 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.62□□□□□ -1.35
RFX1P22670 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFX1P22670 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 AC073365.1-203ENST00000641055 1992 ntBASIC6.62□□□□□ -1.35
RFX1P22670 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
RFX1P22670 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RFX1P22670 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.62□□□□□ -1.35
RFX1P22670 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.61□□□□□ -1.35
RFX1P22670 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.61□□□□□ -1.35
RFX1P22670 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFX1P22670 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.61□□□□□ -1.35
RFX1P22670 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFX1P22670 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
RFX1P22670 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFX1P22670 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFX1P22670 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms