Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
HTR1AP08908 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.13□□□□□ -1.91
HTR1AP08908 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.13□□□□□ -1.91
HTR1AP08908 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.13□□□□□ -1.91
HTR1AP08908 AGGF1P6-201ENST00000569213 976 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 AC087499.8-201ENST00000578406 226 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 AP001180.3-201ENST00000582221 145 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 MIR5187-201ENST00000583479 76 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 AC123768.4-201ENST00000616244 701 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.13□□□□□ -1.91
HTR1AP08908 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTR1AP08908 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
HTR1AP08908 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.12□□□□□ -1.91
HTR1AP08908 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HTR1AP08908 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HTR1AP08908 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 RNU1-13P-201ENST00000384499 162 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.12□□□□□ -1.91
HTR1AP08908 YY1P1-201ENST00000427625 668 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 ETF1P3-201ENST00000430422 1160 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 RPL21P89-201ENST00000444021 467 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 AP002884.2-201ENST00000471647 395 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 AC108064.1-201ENST00000513791 460 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.12□□□□□ -1.91
HTR1AP08908 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.12□□□□□ -1.91
HTR1AP08908 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.12□□□□□ -1.91
HTR1AP08908 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.12□□□□□ -1.91
HTR1AP08908 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.12□□□□□ -1.91
HTR1AP08908 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 MIR6830-201ENST00000636015 70 ntBASIC3.12□□□□□ -1.91
HTR1AP08908 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
HTR1AP08908 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
HTR1AP08908 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HTR1AP08908 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 NMD3P1-201ENST00000439704 1488 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AC107081.3-201ENST00000612715 2034 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 MIR372-201ENST00000362225 67 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.11□□□□□ -1.91
HTR1AP08908 MTCO3P21-201ENST00000430791 643 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.11□□□□□ -1.91
HTR1AP08908 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.11□□□□□ -1.91
HTR1AP08908 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HTR1AP08908 AC078817.1-201ENST00000492623 435 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AC010627.1-201ENST00000503819 1294 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.11□□□□□ -1.91
HTR1AP08908 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.11□□□□□ -1.91
HTR1AP08908 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.11□□□□□ -1.91
HTR1AP08908 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.11□□□□□ -1.91
HTR1AP08908 TRAV37-201ENST00000553906 342 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.11□□□□□ -1.91
HTR1AP08908 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
HTR1AP08908 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 GMCL1P2-201ENST00000605230 823 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AL161912.3-201ENST00000605404 628 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AC016252.1-201ENST00000609721 474 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AC069209.1-201ENST00000619282 651 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 AC010435.1-201ENST00000623353 1177 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.11□□□□□ -1.91
HTR1AP08908 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HTR1AP08908 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.11□□□□□ -1.91
HTR1AP08908 AC110792.3-201ENST00000595906 1614 ntBASIC3.11□□□□□ -1.91
HTR1AP08908 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTR1AP08908 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTR1AP08908 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms