Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RPL6P9-201ENST00000466502 859 ntBASIC3.91□□□□□ -1.78
RETP07949 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.91□□□□□ -1.78
RETP07949 AC011037.1-201ENST00000483964 558 ntBASIC3.91□□□□□ -1.78
RETP07949 AC069499.1-201ENST00000489433 509 ntBASIC3.91□□□□□ -1.78
RETP07949 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
RETP07949 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.91□□□□□ -1.78
RETP07949 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RETP07949 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 RN7SKP57-201ENST00000517248 293 ntBASIC3.91□□□□□ -1.78
RETP07949 AC067904.2-201ENST00000517322 1283 ntBASIC3.91□□□□□ -1.78
RETP07949 AC022790.1-201ENST00000522872 204 ntBASIC3.91□□□□□ -1.78
RETP07949 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AC087888.1-201ENST00000550884 1254 ntBASIC3.91□□□□□ -1.78
RETP07949 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AL161713.1-201ENST00000555538 145 ntBASIC3.91□□□□□ -1.78
RETP07949 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 AC009268.1-201ENST00000561352 1203 ntBASIC3.91□□□□□ -1.78
RETP07949 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.91□□□□□ -1.78
RETP07949 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.91□□□□□ -1.78
RETP07949 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
RETP07949 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 AC243654.2-201ENST00000612843 443 ntBASIC3.91□□□□□ -1.78
RETP07949 AC095038.2-201ENST00000621464 1070 ntBASIC3.91□□□□□ -1.78
RETP07949 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
RETP07949 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
RETP07949 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
RETP07949 AC087565.3-202ENST00000642085 1603 ntBASIC3.91□□□□□ -1.78
RETP07949 AP002001.2-201ENST00000529025 1469 ntBASIC3.91□□□□□ -1.78
RETP07949 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.91□□□□□ -1.78
RETP07949 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RETP07949 AC138393.1-206ENST00000540997 1886 ntBASIC3.9□□□□□ -1.78
RETP07949 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RETP07949 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RETP07949 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RETP07949 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RETP07949 RNA5SP322-201ENST00000363617 119 ntBASIC3.9□□□□□ -1.79
RETP07949 SNORD35B-201ENST00000363660 87 ntBASIC3.9□□□□□ -1.79
RETP07949 AC234772.1-201ENST00000377927 937 ntBASIC3.9□□□□□ -1.79
RETP07949 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
RETP07949 MIR124-3-201ENST00000384866 87 ntBASIC3.9□□□□□ -1.79
RETP07949 HMGB3P19-201ENST00000403971 560 ntBASIC3.9□□□□□ -1.79
RETP07949 RN7SKP56-201ENST00000410513 331 ntBASIC3.9□□□□□ -1.79
RETP07949 PGBD4P8-201ENST00000412993 562 ntBASIC3.9□□□□□ -1.79
RETP07949 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.9□□□□□ -1.79
RETP07949 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.9□□□□□ -1.79
RETP07949 AC087650.1-201ENST00000431445 468 ntBASIC3.9□□□□□ -1.79
RETP07949 MTCO1P45-201ENST00000431457 267 ntBASIC3.9□□□□□ -1.79
RETP07949 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.9□□□□□ -1.79
RETP07949 RAD1P2-201ENST00000446414 663 ntBASIC3.9□□□□□ -1.79
RETP07949 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.9□□□□□ -1.79
RETP07949 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
RETP07949 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.9□□□□□ -1.79
RETP07949 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
RETP07949 RPL23AP62-201ENST00000463396 453 ntBASIC3.9□□□□□ -1.79
RETP07949 AC017015.1-201ENST00000477387 286 ntBASIC3.9□□□□□ -1.79
RETP07949 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.9□□□□□ -1.79
RETP07949 SNX5P1-201ENST00000505757 1041 ntBASIC3.9□□□□□ -1.79
RETP07949 KRT19P6-201ENST00000510983 209 ntBASIC3.9□□□□□ -1.79
RETP07949 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.9□□□□□ -1.79
RETP07949 RN7SKP13-201ENST00000515933 244 ntBASIC3.9□□□□□ -1.79
RETP07949 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RETP07949 OR5B10P-201ENST00000532869 642 ntBASIC3.9□□□□□ -1.79
RETP07949 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
RETP07949 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.9□□□□□ -1.79
RETP07949 MIR5187-201ENST00000583479 76 ntBASIC3.9□□□□□ -1.79
RETP07949 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.9□□□□□ -1.79
RETP07949 MRPS35P3-201ENST00000603189 709 ntBASIC3.9□□□□□ -1.79
RETP07949 AC114878.2-201ENST00000604863 1251 ntBASIC3.9□□□□□ -1.79
RETP07949 AL451044.1-201ENST00000604867 238 ntBASIC3.9□□□□□ -1.79
RETP07949 BNIP3P7-201ENST00000605641 516 ntBASIC3.9□□□□□ -1.79
RETP07949 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.9□□□□□ -1.79
RETP07949 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.9□□□□□ -1.79
RETP07949 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.9□□□□□ -1.79
RETP07949 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.9□□□□□ -1.79
RETP07949 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.9□□□□□ -1.79
RETP07949 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.9□□□□□ -1.79
RETP07949 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
RETP07949 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RETP07949 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RETP07949 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RETP07949 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RETP07949 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
RETP07949 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.89□□□□□ -1.79
RETP07949 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RETP07949 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RETP07949 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RETP07949 MIR423-201ENST00000362201 94 ntBASIC3.89□□□□□ -1.79
RETP07949 RNA5SP167-201ENST00000365461 116 ntBASIC3.89□□□□□ -1.79
RETP07949 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RETP07949 U1.1-201ENST00000384101 164 ntBASIC3.89□□□□□ -1.79
RETP07949 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RETP07949 RPS20P25-201ENST00000412447 352 ntBASIC3.89□□□□□ -1.79
RETP07949 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms