Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.57□□□□□ -1.84
SEMA3DO95025 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.57□□□□□ -1.84
SEMA3DO95025 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.57□□□□□ -1.84
SEMA3DO95025 SETP5-201ENST00000437270 562 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 MTCYBP31-201ENST00000438855 1122 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AP004289.2-201ENST00000444413 1457 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AL157827.1-201ENST00000447622 132 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 PPIAP3-201ENST00000450588 505 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC099563.1-201ENST00000456086 418 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC004801.2-202ENST00000463559 283 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 RPS20P21-201ENST00000466859 343 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC092593.2-201ENST00000513866 913 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 RN7SKP83-201ENST00000516512 178 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.57□□□□□ -1.84
SEMA3DO95025 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AL121576.1-201ENST00000556055 276 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 RN7SL703P-201ENST00000578485 302 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC090912.3-201ENST00000609775 533 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC105429.2-201ENST00000610567 517 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 uc_338.9-201ENST00000617424 182 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 LINC00216-201ENST00000623548 1126 ntBASIC3.57□□□□□ -1.84
SEMA3DO95025 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
SEMA3DO95025 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEMA3DO95025 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SEMA3DO95025 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 RIOK3P1-201ENST00000418778 1528 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SEMA3DO95025 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 MTCO3P31-201ENST00000405526 789 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AIMP1P1-201ENST00000418670 937 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 TCEA1P2-201ENST00000420496 906 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.56□□□□□ -1.84
SEMA3DO95025 MTCO1P57-201ENST00000432182 261 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AL606490.7-201ENST00000433136 191 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.56□□□□□ -1.84
SEMA3DO95025 MRPS33P4-201ENST00000434892 317 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 SKP1P1-201ENST00000438081 489 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC026784.1-201ENST00000507986 352 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SEMA3DO95025 HMGB1P47-201ENST00000511281 589 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.56□□□□□ -1.84
SEMA3DO95025 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC016550.3-201ENST00000515706 767 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AL121766.1-201ENST00000547436 487 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC022884.3-201ENST00000579571 248 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 SS18L2P2-201ENST00000583960 235 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEMA3DO95025 AC018754.1-201ENST00000607486 925 ntBASIC3.56□□□□□ -1.84
SEMA3DO95025 AC084036.1-201ENST00000609190 508 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms