Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC010307.1-201ENST00000467206 836 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 RPS3AP22-201ENST00000488297 769 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC093267.1-201ENST00000489176 961 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 WBP1LP4-201ENST00000505043 344 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 AC109445.1-201ENST00000512356 383 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM38O00635 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM38O00635 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 AP003461.1-201ENST00000528866 78 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM38O00635 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC010546.1-201ENST00000569391 485 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 RNF138P2-201ENST00000603490 592 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL391358.1-201ENST00000605342 190 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AP003392.5-201ENST00000607857 415 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC109347.2-201ENST00000610220 349 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL360219.1-201ENST00000610230 366 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC005332.6-201ENST00000613178 446 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC116165.2-201ENST00000616705 206 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 MIR1322-201ENST00000638013 71 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM38O00635 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 AP000542.2-201ENST00000623199 6179 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM38O00635 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC005832.2-201ENST00000538921 1430 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM38O00635 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 RNU5D-1-201ENST00000363299 116 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 SNORD113-6-201ENST00000363345 75 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRIM38O00635 TAF9BP1-201ENST00000396646 746 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 GLULP6-201ENST00000399502 913 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 AF274854.1-201ENST00000413236 615 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 UBE2V1P10-201ENST00000414685 269 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC092634.6-201ENST00000418558 192 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC234779.1-201ENST00000425910 285 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM38O00635 C4BPAP2-201ENST00000428434 478 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 SKP1P3-201ENST00000429280 487 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC016712.1-201ENST00000431088 378 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC093414.1-201ENST00000434712 514 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 MTATP6P23-201ENST00000440153 476 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AL133477.1-201ENST00000457472 514 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 RPL31P3-201ENST00000458430 332 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC020890.1-201ENST00000491837 504 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC110792.2-201ENST00000510278 224 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC079395.1-201ENST00000510981 262 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 MTCO1P30-201ENST00000515244 580 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 SNORA3.4-201ENST00000515969 96 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC005868.1-201ENST00000536421 331 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM38O00635 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC023161.2-201ENST00000551218 780 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 NDUFB4P11-201ENST00000560510 395 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AL354943.1-201ENST00000572103 781 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC005771.1-201ENST00000585581 349 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 DPRXP5-201ENST00000604662 539 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AL513477.2-201ENST00000607858 568 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC015540.1-201ENST00000615828 501 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC073348.1-201ENST00000623002 331 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM38O00635 AC019226.1-201ENST00000625666 515 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 MIR4278-201ENST00000636094 69 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 MTND5P28-201ENST00000438005 1594 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TRIM38O00635 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms