Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 RPL7P60-201ENST00000397636 735 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 RANP4-201ENST00000413361 655 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AL591419.1-201ENST00000427423 339 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 RPS27AP12-201ENST00000429552 465 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 TPT1P3-201ENST00000492841 512 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC008628.1-201ENST00000508663 265 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 MTCO1P35-201ENST00000515270 228 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 SMARCE1P4-201ENST00000523647 241 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC004923.2-201ENST00000529649 369 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 CYCSP30-201ENST00000546447 172 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 MTCO3P22-201ENST00000603219 784 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 BNIP3P19-201ENST00000605397 577 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 RNU1-30P-201ENST00000606575 163 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC242628.1-201ENST00000606810 391 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC016542.1-201ENST00000608259 493 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 SPATA2P1-201ENST00000431223 2055 ntBASIC3.59□□□□□ -1.83
TRIM49D1C9J1S8 MFSD8-220ENST00000641243 1422 ntBASIC3.59□□□□□ -1.84
TRIM49D1C9J1S8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
TRIM49D1C9J1S8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.84
TRIM49D1C9J1S8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
TRIM49D1C9J1S8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 SPRR2C-201ENST00000290702 219 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RN7SKP227-201ENST00000364445 330 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-304P-201ENST00000364855 107 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNA5SP479-201ENST00000364858 117 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNU1-13P-201ENST00000384499 162 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 MIR30B-201ENST00000384850 88 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 HMGB3P18-201ENST00000406327 590 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC068533.1-201ENST00000418542 415 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL138785.1-201ENST00000425821 331 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC245517.2-201ENST00000442890 346 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL353898.1-201ENST00000444055 238 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RPS3AP46-201ENST00000448352 682 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 HMGN1P5-201ENST00000448591 263 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL672167.3-201ENST00000465951 960 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC006511.1-201ENST00000470614 315 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC020893.1-201ENST00000502452 580 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 HMGB1P3-201ENST00000502802 616 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC110768.1-201ENST00000509222 400 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC093770.1-201ENST00000511559 571 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 HMGN1P15-201ENST00000513870 295 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 RNU2-27P-201ENST00000516185 142 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC007424.1-203ENST00000554613 687 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC007224.1-201ENST00000564410 144 ntBASIC3.58□□□□□ -1.84
TRIM49D1C9J1S8 AC098483.2-201ENST00000603158 454 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms