Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL118496.1-201ENST00000440201 1812 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC104446.1-201ENST00000613728 1321 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU5E-10P-201ENST00000363506 118 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-236P-201ENST00000363886 106 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RN7SKP227-201ENST00000364445 330 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 SNORA72.3-201ENST00000365074 132 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-178P-201ENST00000384631 104 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL603865.2-201ENST00000401679 213 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 SNORA11C-201ENST00000408532 129 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL391219.1-201ENST00000422570 483 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL645638.1-201ENST00000440519 361 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 TVP23BP2-201ENST00000455082 615 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 CDC42P1-201ENST00000456658 548 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 SCARNA14-201ENST00000516903 136 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 HMGB1P23-201ENST00000518743 568 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC008562.1-201ENST00000521763 330 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC124293.1-201ENST00000530034 493 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF971P-201ENST00000562068 1249 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC115085.1-201ENST00000588924 229 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC005255.1-201ENST00000593748 216 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL022067.1-201ENST00000602426 454 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC069431.2-201ENST00000604149 1099 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 Z82195.1-201ENST00000604558 398 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL137849.1-201ENST00000604767 169 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC013468.1-201ENST00000608680 598 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AP003485.1-201ENST00000625093 753 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC046144.1-201ENST00000478559 1853 ntBASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRBV5-4A0A0C4DH59 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-549P-201ENST00000384433 107 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF602P-201ENST00000405929 924 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC092638.1-201ENST00000411966 1275 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC234782.4-201ENST00000417646 1048 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 RPS26P47-201ENST00000427219 348 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 USP12PY-201ENST00000427677 1064 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC005002.1-201ENST00000447458 540 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 DNAJC19P8-201ENST00000452887 259 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC108941.1-201ENST00000502853 530 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC021451.1-201ENST00000523498 1129 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 CYP2C60P-201ENST00000566088 139 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 VN1R88P-201ENST00000596787 292 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC091057.3-201ENST00000602684 733 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 NTAN1P1-201ENST00000603150 646 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 BNIP3P4-201ENST00000604946 565 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC103858.2-201ENST00000621471 543 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 FP236240.3-201ENST00000623061 327 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms