Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCFC2Q9Y5Z7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
HCFC2Q9Y5Z7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 AL137060.1-201ENST00000618151 2648 ntBASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 MIR4674-201ENST00000582457 87 ntBASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
HCFC2Q9Y5Z7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 AC073314.1-201ENST00000568729 2216 ntBASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 SPDYE13P-201ENST00000445314 798 ntBASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HCFC2Q9Y5Z7 AL391422.3-201ENST00000603791 2761 ntBASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.18■□□□□ 0.82
HCFC2Q9Y5Z7 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 NPAP1P7-201ENST00000613027 823 ntBASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 AC020907.5-201ENST00000624372 1936 ntBASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 AL691432.2-201ENST00000607222 2038 ntBASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC2Q9Y5Z7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HCFC2Q9Y5Z7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC2Q9Y5Z7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
HCFC2Q9Y5Z7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms