Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA1Q9Y5H4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 HYMAI.1-201ENST00000620949 238 ntBASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 AL137060.1-201ENST00000618151 2648 ntBASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA1Q9Y5H4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 LINC01311-201ENST00000565162 1445 ntBASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA1Q9Y5H4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA1Q9Y5H4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA1Q9Y5H4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA1Q9Y5H4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA1Q9Y5H4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA1Q9Y5H4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA1Q9Y5H4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA1Q9Y5H4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms