Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 FAM87A-204ENST00000613235 858 ntBASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CTDP1Q9Y5B0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 AC092667.1-201ENST00000434301 2586 ntBASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 AC104076.2-201ENST00000448912 469 ntBASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 DUX4L26-201ENST00000489078 1255 ntBASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTDP1Q9Y5B0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.28■■□□□ 1.16
CTDP1Q9Y5B0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 BX664615.1-201ENST00000443558 458 ntBASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 TSPY17P-201ENST00000450329 467 ntBASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTDP1Q9Y5B0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CTDP1Q9Y5B0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 AC010653.2-201ENST00000623505 997 ntBASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CTDP1Q9Y5B0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.25■■□□□ 1.15
CTDP1Q9Y5B0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms