Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.17■□□□□ 0.82
YIPF1Q9Y548 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 RNF152P1-201ENST00000397754 604 ntBASIC20.17■□□□□ 0.82
YIPF1Q9Y548 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 LINC01238-205ENST00000567549 1107 ntBASIC20.17■□□□□ 0.82
YIPF1Q9Y548 AL512604.3-201ENST00000569583 964 ntBASIC20.17■□□□□ 0.82
YIPF1Q9Y548 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 AC112907.3-201ENST00000577781 2400 ntBASIC20.17■□□□□ 0.82
YIPF1Q9Y548 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
YIPF1Q9Y548 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 CLDN5-201ENST00000403084 2357 ntBASIC20.16■□□□□ 0.82
YIPF1Q9Y548 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 FAM8A6P-201ENST00000407496 1135 ntBASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.16■□□□□ 0.82
YIPF1Q9Y548 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.15■□□□□ 0.82
YIPF1Q9Y548 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.15■□□□□ 0.82
YIPF1Q9Y548 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
YIPF1Q9Y548 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.14■□□□□ 0.82
YIPF1Q9Y548 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.14■□□□□ 0.82
YIPF1Q9Y548 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 KRT8P45-201ENST00000414328 1447 ntBASIC20.14■□□□□ 0.81
YIPF1Q9Y548 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.14■□□□□ 0.81
YIPF1Q9Y548 TSPY5P-201ENST00000426936 936 ntBASIC20.14■□□□□ 0.81
YIPF1Q9Y548 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms