Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 AL020996.1-203ENST00000536896 2307 ntBASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 AL031963.3-201ENST00000606441 850 ntBASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 KRT16P6-202ENST00000425692 1426 ntBASIC19.51■□□□□ 0.71
NCKIPSDQ9NZQ3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 AF186192.3-201ENST00000583427 947 ntBASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 AC026471.5-201ENST00000615068 467 ntBASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 KRT8P20-201ENST00000423953 1409 ntBASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NCKIPSDQ9NZQ3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 AL355355.2-201ENST00000442321 338 ntBASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 HTR7P1-201ENST00000538670 1336 ntBASIC19.49■□□□□ 0.71
NCKIPSDQ9NZQ3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms