Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VCX3AQ9NNX9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VCX3AQ9NNX9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
VCX3AQ9NNX9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.03■□□□□ 0.48
VCX3AQ9NNX9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
VCX3AQ9NNX9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.02■□□□□ 0.47
VCX3AQ9NNX9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VCX3AQ9NNX9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18■□□□□ 0.47
VCX3AQ9NNX9 AC061975.6-201ENST00000579045 1553 ntBASIC18■□□□□ 0.47
VCX3AQ9NNX9 SYT6-210ENST00000641643 1587 ntBASIC18■□□□□ 0.47
VCX3AQ9NNX9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VCX3AQ9NNX9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VCX3AQ9NNX9 AL033527.3-201ENST00000566366 1196 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms