Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 NAPSB-206ENST00000562112 1266 ntBASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 AC145285.6-201ENST00000604632 637 ntBASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1G1Q9HCP0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 TSPY14P-201ENST00000303979 915 ntBASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 ECEL1P3-201ENST00000427961 737 ntBASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 TSPY23P-201ENST00000440136 739 ntBASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1G1Q9HCP0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 EGLN1P1-201ENST00000531623 762 ntBASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CSNK1G1Q9HCP0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.18■□□□□ 0.82
CSNK1G1Q9HCP0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1G1Q9HCP0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1G1Q9HCP0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms