Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH23Q9H251 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CDH23Q9H251 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH23Q9H251 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDH23Q9H251 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH23Q9H251 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH23Q9H251 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDH23Q9H251 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH23Q9H251 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 AC091304.2-201ENST00000564639 760 ntBASIC20.55■□□□□ 0.88
CDH23Q9H251 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH23Q9H251 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CDH23Q9H251 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CDH23Q9H251 FOSL1P1-201ENST00000511041 816 ntBASIC20.55■□□□□ 0.88
CDH23Q9H251 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 AL121672.3-201ENST00000608644 468 ntBASIC20.55■□□□□ 0.88
CDH23Q9H251 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDH23Q9H251 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH23Q9H251 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.54■□□□□ 0.88
CDH23Q9H251 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH23Q9H251 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH23Q9H251 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 AL590627.1-203ENST00000421194 1026 ntBASIC20.54■□□□□ 0.88
CDH23Q9H251 TUBB8P6-201ENST00000436895 1288 ntBASIC20.54■□□□□ 0.88
CDH23Q9H251 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH23Q9H251 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.54■□□□□ 0.88
CDH23Q9H251 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH23Q9H251 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDH23Q9H251 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH23Q9H251 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH23Q9H251 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.54■□□□□ 0.88
CDH23Q9H251 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH23Q9H251 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CDH23Q9H251 TMEM179-206ENST00000616017 1645 ntBASIC20.54■□□□□ 0.88
CDH23Q9H251 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 DRAXINP1-201ENST00000437611 948 ntBASIC20.53■□□□□ 0.88
CDH23Q9H251 RASA4DP-201ENST00000460726 1199 ntBASIC20.53■□□□□ 0.88
CDH23Q9H251 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH23Q9H251 AC092865.5-201ENST00000545435 363 ntBASIC20.53■□□□□ 0.88
CDH23Q9H251 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CDH23Q9H251 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH23Q9H251 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH23Q9H251 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH23Q9H251 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH23Q9H251 PHGDH-210ENST00000641115 1638 ntBASIC20.53■□□□□ 0.88
CDH23Q9H251 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDH23Q9H251 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH23Q9H251 TOB2P1-201ENST00000469761 992 ntBASIC20.52■□□□□ 0.88
CDH23Q9H251 AC012615.1-201ENST00000565797 1299 ntBASIC20.52■□□□□ 0.88
CDH23Q9H251 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CDH23Q9H251 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH23Q9H251 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDH23Q9H251 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDH23Q9H251 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.52■□□□□ 0.88
CDH23Q9H251 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH23Q9H251 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH23Q9H251 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms