Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 UNC93B5-201ENST00000530315 699 ntBASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 PNMA6B-201ENST00000538162 1200 ntBASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 AL121906.2-201ENST00000621597 723 ntBASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUCKS1Q9H1E3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 RPS2P52-201ENST00000469610 820 ntBASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUCKS1Q9H1E3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 AP006587.1-201ENST00000534129 1502 ntBASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 KRT8P8-201ENST00000434750 1448 ntBASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.89■□□□□ 0.94
NUCKS1Q9H1E3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.89■□□□□ 0.93
NUCKS1Q9H1E3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 AC104417.2-201ENST00000562989 1793 ntBASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 AC006557.6-201ENST00000623071 864 ntBASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUCKS1Q9H1E3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms