Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.02■□□□□ 0.8
RNF38Q9H0F5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 CKBP1-201ENST00000565489 1086 ntBASIC20.02■□□□□ 0.8
RNF38Q9H0F5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 AL023803.3-201ENST00000615559 522 ntBASIC20.02■□□□□ 0.8
RNF38Q9H0F5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF38Q9H0F5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF38Q9H0F5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF38Q9H0F5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
RNF38Q9H0F5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF38Q9H0F5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AC007663.1-201ENST00000438948 1240 ntBASIC20.01■□□□□ 0.79
RNF38Q9H0F5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AL049597.2-201ENST00000565575 961 ntBASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AL445228.2-201ENST00000605589 952 ntBASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AC116562.4-202ENST00000641738 218 ntBASIC20.01■□□□□ 0.79
RNF38Q9H0F5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF38Q9H0F5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 LIN28AP1-201ENST00000429574 405 ntBASIC20■□□□□ 0.79
RNF38Q9H0F5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 KRT8P11-201ENST00000409686 1436 ntBASIC20■□□□□ 0.79
RNF38Q9H0F5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20■□□□□ 0.79
RNF38Q9H0F5 AC092338.2-201ENST00000568827 1415 ntBASIC20■□□□□ 0.79
RNF38Q9H0F5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF38Q9H0F5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20■□□□□ 0.79
RNF38Q9H0F5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 ZNF815P-204ENST00000434898 1737 ntBASIC19.99■□□□□ 0.79
RNF38Q9H0F5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms