Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AP001271.2-201ENST00000624018 1556 ntBASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 AL390719.1-204ENST00000412397 1219 ntBASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 AC097658.1-201ENST00000475555 843 ntBASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 MYC-209ENST00000641252 345 ntBASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CHRDL1Q9BU40 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 TREX1-205ENST00000625293 1783 ntBASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 AC005829.2-201ENST00000571422 1056 ntBASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 AC104771.1-201ENST00000603335 964 ntBASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRDL1Q9BU40 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 AC006557.6-201ENST00000623071 864 ntBASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRDL1Q9BU40 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRDL1Q9BU40 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRDL1Q9BU40 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRDL1Q9BU40 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRDL1Q9BU40 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRDL1Q9BU40 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms