Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
FOXC2Q99958 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXC2Q99958 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXC2Q99958 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 NUS1P1-201ENST00000446295 882 ntBASIC16.26■□□□□ 0.19
FOXC2Q99958 TSSC2-201ENST00000450217 709 ntBASIC16.26■□□□□ 0.19
FOXC2Q99958 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 UNC93B7-201ENST00000509439 705 ntBASIC16.26■□□□□ 0.19
FOXC2Q99958 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.26■□□□□ 0.19
FOXC2Q99958 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXC2Q99958 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
FOXC2Q99958 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXC2Q99958 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXC2Q99958 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXC2Q99958 SPDYE15P-201ENST00000424157 909 ntBASIC16.25■□□□□ 0.19
FOXC2Q99958 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 AL160286.2-201ENST00000567150 934 ntBASIC16.25■□□□□ 0.19
FOXC2Q99958 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 AL121672.3-201ENST00000608644 468 ntBASIC16.25■□□□□ 0.19
FOXC2Q99958 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 PHGDH-210ENST00000641115 1638 ntBASIC16.25■□□□□ 0.19
FOXC2Q99958 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXC2Q99958 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXC2Q99958 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
FOXC2Q99958 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXC2Q99958 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
FOXC2Q99958 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXC2Q99958 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXC2Q99958 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FOXC2Q99958 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FOXC2Q99958 HBZP1-201ENST00000354915 429 ntBASIC16.24■□□□□ 0.19
FOXC2Q99958 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 SPDYE13P-201ENST00000445314 798 ntBASIC16.24■□□□□ 0.19
FOXC2Q99958 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXC2Q99958 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXC2Q99958 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXC2Q99958 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXC2Q99958 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXC2Q99958 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 KRT8P8-201ENST00000434750 1448 ntBASIC16.23■□□□□ 0.19
FOXC2Q99958 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXC2Q99958 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 BX276092.5-203ENST00000456199 560 ntBASIC16.23■□□□□ 0.19
FOXC2Q99958 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
FOXC2Q99958 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.23■□□□□ 0.19
FOXC2Q99958 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms