Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LITAFQ99732 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 GNAS-203ENST00000306120 1878 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.85□□□□□ -0.35
LITAFQ99732 TNRC18P3-201ENST00000441896 2691 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 OR2A1-AS1-204ENST00000470435 602 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 CDV3P1-201ENST00000471403 739 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 AC012414.1-201ENST00000556676 535 ntBASIC12.85□□□□□ -0.35
LITAFQ99732 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.85□□□□□ -0.35
LITAFQ99732 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.85□□□□□ -0.35
LITAFQ99732 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.85□□□□□ -0.35
LITAFQ99732 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.85□□□□□ -0.35
LITAFQ99732 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LITAFQ99732 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LITAFQ99732 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC12.85□□□□□ -0.35
LITAFQ99732 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 AC134043.2-201ENST00000624206 2238 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC12.84□□□□□ -0.35
LITAFQ99732 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.84□□□□□ -0.35
LITAFQ99732 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L2-201ENST00000561772 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L6-201ENST00000626483 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L1-201ENST00000627662 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L8-201ENST00000629013 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L3-201ENST00000630187 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L7-201ENST00000630678 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 DUX4L5-201ENST00000630834 1275 ntBASIC12.84□□□□□ -0.35
LITAFQ99732 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.84□□□□□ -0.35
LITAFQ99732 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.84□□□□□ -0.35
LITAFQ99732 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.84□□□□□ -0.35
LITAFQ99732 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LITAFQ99732 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LITAFQ99732 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms