Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
NDNQ99608 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.32■□□□□ 0.68
NDNQ99608 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NDNQ99608 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NDNQ99608 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NDNQ99608 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.32■□□□□ 0.68
NDNQ99608 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.32■□□□□ 0.68
NDNQ99608 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.32■□□□□ 0.68
NDNQ99608 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.32■□□□□ 0.68
NDNQ99608 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.32■□□□□ 0.68
NDNQ99608 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.32■□□□□ 0.68
NDNQ99608 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NDNQ99608 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
NDNQ99608 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.32■□□□□ 0.68
NDNQ99608 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDNQ99608 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.32■□□□□ 0.68
NDNQ99608 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 AC005332.8-201ENST00000622750 2735 ntBASIC19.31■□□□□ 0.68
NDNQ99608 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NDNQ99608 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.31■□□□□ 0.68
NDNQ99608 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NDNQ99608 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NDNQ99608 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.31■□□□□ 0.68
NDNQ99608 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.31■□□□□ 0.68
NDNQ99608 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.31■□□□□ 0.68
NDNQ99608 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NDNQ99608 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.31■□□□□ 0.68
NDNQ99608 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 ZNF815P-204ENST00000434898 1737 ntBASIC19.31■□□□□ 0.68
NDNQ99608 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDNQ99608 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
NDNQ99608 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NDNQ99608 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NDNQ99608 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.3■□□□□ 0.68
NDNQ99608 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDNQ99608 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.3■□□□□ 0.68
NDNQ99608 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.3■□□□□ 0.68
NDNQ99608 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NDNQ99608 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.3■□□□□ 0.68
NDNQ99608 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDNQ99608 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
NDNQ99608 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NDNQ99608 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.29■□□□□ 0.68
NDNQ99608 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDNQ99608 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NDNQ99608 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms