Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AC005332.7-201ENST00000614046 2005 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AL032819.2-201ENST00000624543 2162 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 MIR718-201ENST00000390190 70 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 Z85996.1-201ENST00000494644 937 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 CD177P1-201ENST00000606252 935 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AP001412.1-201ENST00000608405 714 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.07■□□□□ 0.16
GAFA1Q96PS6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GAFA1Q96PS6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAFA1Q96PS6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 AC026271.3-201ENST00000571884 352 ntBASIC16.05■□□□□ 0.16
GAFA1Q96PS6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 AL031985.4-201ENST00000642138 673 ntBASIC16.05■□□□□ 0.16
GAFA1Q96PS6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
GAFA1Q96PS6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms