Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 AL354751.1-201ENST00000412768 1863 ntBASIC14.74□□□□□ -0.05
LINC00479Q96M42 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 AC123595.1-201ENST00000440769 1046 ntBASIC14.74□□□□□ -0.05
LINC00479Q96M42 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 AC068880.1-201ENST00000507289 2297 ntBASIC14.74□□□□□ -0.05
LINC00479Q96M42 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00479Q96M42 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00479Q96M42 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 NOC2LP1-202ENST00000452600 2235 ntBASIC14.73□□□□□ -0.05
LINC00479Q96M42 Z98044.1-201ENST00000632503 1764 ntBASIC14.73□□□□□ -0.05
LINC00479Q96M42 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.73□□□□□ -0.05
LINC00479Q96M42 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 KRT18P14-201ENST00000534205 1250 ntBASIC14.73□□□□□ -0.05
LINC00479Q96M42 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 AP000997.3-201ENST00000623333 2250 ntBASIC14.73□□□□□ -0.05
LINC00479Q96M42 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00479Q96M42 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00479Q96M42 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00479Q96M42 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00479Q96M42 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms