Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AC026271.3-201ENST00000571884 352 ntBASIC17.36■□□□□ 0.37
LRRC46Q96FV0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC46Q96FV0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 YBX1P10-201ENST00000444752 975 ntBASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AL049597.2-201ENST00000565575 961 ntBASIC17.35■□□□□ 0.37
LRRC46Q96FV0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
LRRC46Q96FV0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC46Q96FV0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.34■□□□□ 0.37
LRRC46Q96FV0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 TUBB8P6-201ENST00000436895 1288 ntBASIC17.34■□□□□ 0.37
LRRC46Q96FV0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 FITM1-202ENST00000559294 800 ntBASIC17.34■□□□□ 0.37
LRRC46Q96FV0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC46Q96FV0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms