Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 TCF3P1-201ENST00000423021 1937 ntBASIC20.3■□□□□ 0.84
ATP2A3Q93084 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 TMPOP1-202ENST00000424642 1267 ntBASIC20.3■□□□□ 0.84
ATP2A3Q93084 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 FITM1-202ENST00000559294 800 ntBASIC20.3■□□□□ 0.84
ATP2A3Q93084 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 NAPSB-206ENST00000562112 1266 ntBASIC20.3■□□□□ 0.84
ATP2A3Q93084 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A3Q93084 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A3Q93084 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 KRT8P9-201ENST00000558927 1449 ntBASIC20.29■□□□□ 0.84
ATP2A3Q93084 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 TUBB8P6-201ENST00000436895 1288 ntBASIC20.29■□□□□ 0.84
ATP2A3Q93084 KRT18P16-201ENST00000510337 1294 ntBASIC20.29■□□□□ 0.84
ATP2A3Q93084 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 AL445675.2-201ENST00000620291 557 ntBASIC20.29■□□□□ 0.84
ATP2A3Q93084 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ATP2A3Q93084 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A3Q93084 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 PHGDH-210ENST00000641115 1638 ntBASIC20.28■□□□□ 0.84
ATP2A3Q93084 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 AC005363.2-201ENST00000618631 242 ntBASIC20.28■□□□□ 0.84
ATP2A3Q93084 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 FSCN1P1-201ENST00000568912 1481 ntBASIC20.28■□□□□ 0.84
ATP2A3Q93084 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A3Q93084 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A3Q93084 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2A3Q93084 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A3Q93084 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms