Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 AC128676.1-201ENST00000454392 318 ntBASIC18.84■□□□□ 0.61
ATL1Q8WXF7 KRT16P5-201ENST00000455284 522 ntBASIC18.84■□□□□ 0.61
ATL1Q8WXF7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATL1Q8WXF7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATL1Q8WXF7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 C1QL1P1-201ENST00000568105 661 ntBASIC18.83■□□□□ 0.6
ATL1Q8WXF7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 MIR4651-201ENST00000582622 73 ntBASIC18.83■□□□□ 0.6
ATL1Q8WXF7 AC110285.5-201ENST00000611501 352 ntBASIC18.83■□□□□ 0.6
ATL1Q8WXF7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.83■□□□□ 0.6
ATL1Q8WXF7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 AC124016.1-201ENST00000609552 612 ntBASIC18.82■□□□□ 0.6
ATL1Q8WXF7 AC104417.2-201ENST00000562989 1793 ntBASIC18.82■□□□□ 0.6
ATL1Q8WXF7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
ATL1Q8WXF7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATL1Q8WXF7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms