Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 TEX21P-204ENST00000641479 1693 ntBASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 AL162430.1-201ENST00000480705 870 ntBASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 AC013268.1-206ENST00000638368 961 ntBASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 AC112229.1-201ENST00000639295 961 ntBASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3IL1Q8TBN0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 AL049812.1-201ENST00000432563 2267 ntBASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 AL031598.1-201ENST00000561511 1773 ntBASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 AC135050.7-201ENST00000624508 2218 ntBASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3IL1Q8TBN0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 AC009113.1-201ENST00000570267 2443 ntBASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 KRT18P68-201ENST00000392293 1000 ntBASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 RARRES2P4-201ENST00000514074 484 ntBASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3IL1Q8TBN0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3IL1Q8TBN0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms