Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
SHKBP1Q8TBC3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHKBP1Q8TBC3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SHKBP1Q8TBC3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SHKBP1Q8TBC3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHKBP1Q8TBC3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 WWOX-216ENST00000569818 525 ntBASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHKBP1Q8TBC3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 AL160286.2-201ENST00000567150 934 ntBASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 AC116562.4-202ENST00000641738 218 ntBASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SHKBP1Q8TBC3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 LINC01465-201ENST00000408887 1940 ntBASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 HMGA1P5-201ENST00000412453 271 ntBASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms