Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL9Q8NET4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.78■■□□□ 1.4
RTL9Q8NET4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 LINC01238-205ENST00000567549 1107 ntBASIC23.78■■□□□ 1.4
RTL9Q8NET4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL9Q8NET4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL9Q8NET4 AC091076.1-201ENST00000610741 619 ntBASIC23.77■■□□□ 1.4
RTL9Q8NET4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RTL9Q8NET4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.77■■□□□ 1.39
RTL9Q8NET4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
RTL9Q8NET4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 LINC01006-201ENST00000333319 2292 ntBASIC23.76■■□□□ 1.39
RTL9Q8NET4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.76■■□□□ 1.39
RTL9Q8NET4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL9Q8NET4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.75■■□□□ 1.39
RTL9Q8NET4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 TSPY5P-201ENST00000426936 936 ntBASIC23.75■■□□□ 1.39
RTL9Q8NET4 TSPY23P-201ENST00000440136 739 ntBASIC23.75■■□□□ 1.39
RTL9Q8NET4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL9Q8NET4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL9Q8NET4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RTL9Q8NET4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL9Q8NET4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms