Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 AC138907.5-202ENST00000569484 235 ntBASIC17.03■□□□□ 0.32
DTX3Q8N9I9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 AC007322.3-201ENST00000426526 701 ntBASIC17.02■□□□□ 0.32
DTX3Q8N9I9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 AC080038.1-201ENST00000611274 1154 ntBASIC17.02■□□□□ 0.32
DTX3Q8N9I9 AC092437.1-201ENST00000624794 1048 ntBASIC17.02■□□□□ 0.32
DTX3Q8N9I9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DTX3Q8N9I9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
DTX3Q8N9I9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 AC091799.1-201ENST00000422823 811 ntBASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 KRT18P20-201ENST00000548986 1279 ntBASIC17.01■□□□□ 0.31
DTX3Q8N9I9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 AC006333.2-201ENST00000607957 2099 ntBASIC17.01■□□□□ 0.31
DTX3Q8N9I9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DTX3Q8N9I9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DTX3Q8N9I9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DTX3Q8N9I9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DTX3Q8N9I9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17■□□□□ 0.31
DTX3Q8N9I9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DTX3Q8N9I9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17■□□□□ 0.31
DTX3Q8N9I9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
DTX3Q8N9I9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17■□□□□ 0.31
DTX3Q8N9I9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms