Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9CQ8N5M4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 AC233263.1-201ENST00000578059 224 ntBASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 AC104417.2-201ENST00000562989 1793 ntBASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC9CQ8N5M4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 RN7SL471P-201ENST00000580476 299 ntBASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC9CQ8N5M4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 AC239809.2-201ENST00000415381 517 ntBASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 AC133681.1-201ENST00000465482 601 ntBASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 AC006058.3-201ENST00000606217 1069 ntBASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 AL023875.1-201ENST00000640777 796 ntBASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC9CQ8N5M4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms