Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 AC093909.1-201ENST00000504731 1122 ntBASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LTBP4Q8N2S1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 YBX2P1-201ENST00000394192 760 ntBASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTBP4Q8N2S1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
LTBP4Q8N2S1 KRT16P6-202ENST00000425692 1426 ntBASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 Z83836.1-201ENST00000624605 1642 ntBASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LTBP4Q8N2S1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 RFPL4AP1-201ENST00000530883 850 ntBASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 AC090616.6-201ENST00000582640 721 ntBASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 AC134684.3-201ENST00000641758 218 ntBASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 NSUN5P1-202ENST00000421140 1535 ntBASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 NSUN5P2-203ENST00000457352 1529 ntBASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTBP4Q8N2S1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 DNAJB3-202ENST00000449667 1266 ntBASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 AP005901.3-202ENST00000581653 237 ntBASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC26.93■■□□□ 1.9
LTBP4Q8N2S1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTBP4Q8N2S1 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 LBH-203ENST00000404397 543 ntTSL 4 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 SCARNA2-201ENST00000458748 420 ntBASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 AL356488.2-201ENST00000602755 427 ntBASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LTBP4Q8N2S1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms