Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RBM17P1-201ENST00000453646 1190 ntBASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM48Q8IWZ4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 AC004980.1-204ENST00000429707 299 ntBASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 AC116562.2-201ENST00000507042 360 ntBASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 MIR6786-201ENST00000616843 113 ntBASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 AC112907.3-201ENST00000577781 2400 ntBASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM48Q8IWZ4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 MMP23A-201ENST00000234610 1017 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 AC211429.1-201ENST00000415277 523 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 LINC01023-201ENST00000606054 436 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 AP000525.1-201ENST00000608286 694 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 AC133561.5-201ENST00000635547 218 ntBASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM48Q8IWZ4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 MIR1238-201ENST00000408483 83 ntBASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 AC087499.1-201ENST00000418141 1075 ntBASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms