Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 VENTXP5-201ENST00000523979 775 ntBASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 STARP1-201ENST00000397973 869 ntBASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 AC112907.2-201ENST00000448639 330 ntBASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS4Q8IUM7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.91
NPAS4Q8IUM7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NPAS4Q8IUM7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NPAS4Q8IUM7 PKD1P6-201ENST00000343738 4769 ntBASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 ZNF444P1-201ENST00000559497 298 ntBASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 GCSHP2-201ENST00000560971 527 ntBASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 AC069148.1-201ENST00000608741 768 ntBASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS4Q8IUM7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 AC083849.1-201ENST00000615227 514 ntBASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS4Q8IUM7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 HCG4P8-203ENST00000443049 980 ntBASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 MIR4674-201ENST00000582457 87 ntBASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 HYMAI.1-201ENST00000620949 238 ntBASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 AL391422.3-201ENST00000603791 2761 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms