Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 AL121906.2-201ENST00000621597 723 ntBASIC19.67■□□□□ 0.74
CASC4Q6P4E1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AP006587.1-201ENST00000534129 1502 ntBASIC19.66■□□□□ 0.74
CASC4Q6P4E1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 PNMA6B-201ENST00000538162 1200 ntBASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AC098934.4-201ENST00000564127 592 ntBASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AL138781.1-201ENST00000566567 1274 ntBASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 MYC-209ENST00000641252 345 ntBASIC19.66■□□□□ 0.74
CASC4Q6P4E1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CASC4Q6P4E1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.65■□□□□ 0.74
CASC4Q6P4E1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.65■□□□□ 0.74
CASC4Q6P4E1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 AC060766.5-201ENST00000590539 871 ntBASIC19.65■□□□□ 0.74
CASC4Q6P4E1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 AC092666.2-201ENST00000613287 246 ntBASIC19.65■□□□□ 0.74
CASC4Q6P4E1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 ZNF815P-204ENST00000434898 1737 ntBASIC19.65■□□□□ 0.74
CASC4Q6P4E1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
CASC4Q6P4E1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASC4Q6P4E1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.64■□□□□ 0.73
CASC4Q6P4E1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 AL109923.1-201ENST00000618799 583 ntBASIC19.64■□□□□ 0.73
CASC4Q6P4E1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASC4Q6P4E1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.63■□□□□ 0.73
CASC4Q6P4E1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms