Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 CNN2P6-201ENST00000439038 900 ntBASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 AC069236.1-201ENST00000604339 616 ntBASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00242Q5T6M2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 MIR638-201ENST00000385237 100 ntBASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 TFP1-202ENST00000475455 1573 ntBASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00242Q5T6M2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 AL512353.2-201ENST00000448759 1962 ntBASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 AC008694.1-202ENST00000636953 945 ntBASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms