Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.61□□□□□ -0.71
UBR4Q5T4S7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.61□□□□□ -0.71
UBR4Q5T4S7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC10.61□□□□□ -0.71
UBR4Q5T4S7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.61□□□□□ -0.71
UBR4Q5T4S7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBR4Q5T4S7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 ARSEP1-201ENST00000420443 635 ntBASIC10.6□□□□□ -0.71
UBR4Q5T4S7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 AC073592.5-201ENST00000624854 528 ntBASIC10.6□□□□□ -0.71
UBR4Q5T4S7 Z83836.1-201ENST00000624605 1642 ntBASIC10.6□□□□□ -0.71
UBR4Q5T4S7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 AC005332.3-201ENST00000589904 676 ntBASIC10.6□□□□□ -0.71
UBR4Q5T4S7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBR4Q5T4S7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 YBX1P5-201ENST00000509441 847 ntBASIC10.59□□□□□ -0.71
UBR4Q5T4S7 EED-207ENST00000528180 1745 ntTSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
UBR4Q5T4S7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 LINC01124-201ENST00000409786 2117 ntBASIC10.58□□□□□ -0.72
UBR4Q5T4S7 HLA-F-220ENST00000434407 884 ntBASIC10.58□□□□□ -0.72
UBR4Q5T4S7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 AC026740.1-201ENST00000607068 791 ntBASIC10.58□□□□□ -0.72
UBR4Q5T4S7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms