Protein–RNA interactions for Protein: Q5JUK3

KCNT1, Potassium channel subfamily T member 1, humanhuman

Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1Q5JUK3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 MIR718-201ENST00000390190 70 ntBASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 SNORA78-201ENST00000459373 127 ntBASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNT1Q5JUK3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 PRKY-204ENST00000533551 1019 ntBASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 MTDHP1-201ENST00000605323 784 ntBASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNT1Q5JUK3 SDHAP1-207ENST00000440850 2000 ntBASIC20.2■□□□□ 0.83
KCNT1Q5JUK3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNT1Q5JUK3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 AC104417.2-201ENST00000562989 1793 ntBASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 AL023875.1-201ENST00000640777 796 ntBASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KCNT1Q5JUK3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNT1Q5JUK3 NBPF21P-201ENST00000425093 1451 ntBASIC20.18■□□□□ 0.82
KCNT1Q5JUK3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNT1Q5JUK3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNT1Q5JUK3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNT1Q5JUK3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms