Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 AL160286.2-201ENST00000567150 934 ntBASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 AL445675.2-201ENST00000620291 557 ntBASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.78■□□□□ 0.6
CCSMST1Q4G0I0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 AL353807.1-201ENST00000427475 662 ntBASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 AC233702.5-201ENST00000584107 538 ntBASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 AC073195.1-201ENST00000607241 877 ntBASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 AC113410.3-201ENST00000623366 203 ntBASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSMST1Q4G0I0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCSMST1Q4G0I0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCSMST1Q4G0I0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCSMST1Q4G0I0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCSMST1Q4G0I0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 TEX21P-204ENST00000641479 1693 ntBASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 KSR1P1-201ENST00000446298 240 ntBASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 Z85996.1-201ENST00000494644 937 ntBASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCSMST1Q4G0I0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 AC012618.2-201ENST00000428058 849 ntBASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 CD177P1-201ENST00000606252 935 ntBASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 AC066615.1-201ENST00000640911 628 ntBASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 AL049637.2-201ENST00000641778 930 ntBASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCSMST1Q4G0I0 KRT16P1-201ENST00000399124 1418 ntBASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 AL135905.2-201ENST00000584934 1404 ntBASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCSMST1Q4G0I0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms