Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 AC093503.3-201ENST00000624917 2352 ntBASIC21.94■■□□□ 1.1
LONRF3Q496Y0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.94■■□□□ 1.1
LONRF3Q496Y0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 KRASP1-201ENST00000407852 552 ntBASIC21.93■■□□□ 1.1
LONRF3Q496Y0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 AC124016.1-201ENST00000609552 612 ntBASIC21.93■■□□□ 1.1
LONRF3Q496Y0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LONRF3Q496Y0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 AC239809.2-201ENST00000415381 517 ntBASIC21.92■■□□□ 1.1
LONRF3Q496Y0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 SNORA78-201ENST00000459373 127 ntBASIC21.92■■□□□ 1.1
LONRF3Q496Y0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
LONRF3Q496Y0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 TEX21P-204ENST00000641479 1693 ntBASIC21.91■■□□□ 1.1
LONRF3Q496Y0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
LONRF3Q496Y0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 ZNF815P-204ENST00000434898 1737 ntBASIC21.9■■□□□ 1.1
LONRF3Q496Y0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 MIR718-201ENST00000390190 70 ntBASIC21.9■■□□□ 1.1
LONRF3Q496Y0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms