Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SYCNQ0VAF6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.77□□□□□ -0.37
SYCNQ0VAF6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SYCNQ0VAF6 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.77□□□□□ -0.37
SYCNQ0VAF6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 AL032819.2-201ENST00000624543 2162 ntBASIC12.76□□□□□ -0.37
SYCNQ0VAF6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 AL121829.2-201ENST00000620908 328 ntBASIC12.76□□□□□ -0.37
SYCNQ0VAF6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SYCNQ0VAF6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 PRKY-204ENST00000533551 1019 ntBASIC12.75□□□□□ -0.37
SYCNQ0VAF6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SYCNQ0VAF6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 AC018445.3-201ENST00000624177 1945 ntBASIC12.74□□□□□ -0.37
SYCNQ0VAF6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SYCNQ0VAF6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms