Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 FICD-205ENST00000552758 603 ntTSL 2 BASIC12□□□□□ -0.49
HSPG2P98160 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12□□□□□ -0.49
HSPG2P98160 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HSPG2P98160 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12□□□□□ -0.49
HSPG2P98160 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12□□□□□ -0.49
HSPG2P98160 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12□□□□□ -0.49
HSPG2P98160 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12□□□□□ -0.49
HSPG2P98160 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HSPG2P98160 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12□□□□□ -0.49
HSPG2P98160 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.99□□□□□ -0.49
HSPG2P98160 DPP3P2-201ENST00000416030 1696 ntBASIC11.99□□□□□ -0.49
HSPG2P98160 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC11.99□□□□□ -0.49
HSPG2P98160 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HSPG2P98160 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.99□□□□□ -0.49
HSPG2P98160 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
HSPG2P98160 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
HSPG2P98160 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 AL117328.2-201ENST00000624617 1940 ntBASIC11.99□□□□□ -0.49
HSPG2P98160 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HSPG2P98160 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.99□□□□□ -0.49
HSPG2P98160 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HSPG2P98160 AC148477.8-201ENST00000624298 468 ntBASIC11.99□□□□□ -0.49
HSPG2P98160 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC11.99□□□□□ -0.49
HSPG2P98160 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.99□□□□□ -0.49
HSPG2P98160 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HSPG2P98160 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.98□□□□□ -0.49
HSPG2P98160 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.98□□□□□ -0.49
HSPG2P98160 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.98□□□□□ -0.49
HSPG2P98160 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HSPG2P98160 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.98□□□□□ -0.49
HSPG2P98160 AC024243.1-201ENST00000609234 778 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 GPX1P2-201ENST00000429271 606 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 HLA-J-202ENST00000469281 1241 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 AL157888.1-201ENST00000631930 593 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 IGHV3-47-201ENST00000425060 335 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.98□□□□□ -0.49
HSPG2P98160 AC064862.7-201ENST00000604520 867 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 AL691403.2-201ENST00000618460 490 ntBASIC11.98□□□□□ -0.49
HSPG2P98160 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.98□□□□□ -0.49
HSPG2P98160 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC11.98□□□□□ -0.49
HSPG2P98160 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC11.98□□□□□ -0.49
HSPG2P98160 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HSPG2P98160 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 Z83836.1-201ENST00000624605 1642 ntBASIC11.97□□□□□ -0.49
HSPG2P98160 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 AP001005.1-201ENST00000571755 1248 ntBASIC11.97□□□□□ -0.49
HSPG2P98160 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 AL773604.1-201ENST00000617417 272 ntBASIC11.97□□□□□ -0.49
HSPG2P98160 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.97□□□□□ -0.49
HSPG2P98160 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 PMS2P7-201ENST00000506558 1336 ntBASIC11.97□□□□□ -0.49
HSPG2P98160 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.97□□□□□ -0.49
HSPG2P98160 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HSPG2P98160 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC11.97□□□□□ -0.49
HSPG2P98160 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.97□□□□□ -0.49
HSPG2P98160 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.97□□□□□ -0.49
HSPG2P98160 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HSPG2P98160 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms