Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 KRT16P5-201ENST00000455284 522 ntBASIC16.87■□□□□ 0.29
HIST1H3AP68431 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 HLA-A-209ENST00000638375 975 ntBASIC16.87■□□□□ 0.29
HIST1H3AP68431 AL023875.1-201ENST00000640777 796 ntBASIC16.87■□□□□ 0.29
HIST1H3AP68431 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 KRASP1-201ENST00000407852 552 ntBASIC16.86■□□□□ 0.29
HIST1H3AP68431 AC239809.2-201ENST00000415381 517 ntBASIC16.86■□□□□ 0.29
HIST1H3AP68431 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 CD99P1-205ENST00000527459 561 ntBASIC16.86■□□□□ 0.29
HIST1H3AP68431 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 AC124016.1-201ENST00000609552 612 ntBASIC16.86■□□□□ 0.29
HIST1H3AP68431 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 AC073648.6-201ENST00000641589 218 ntBASIC16.86■□□□□ 0.29
HIST1H3AP68431 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST1H3AP68431 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H3AP68431 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 MIR4651-201ENST00000582622 73 ntBASIC16.85■□□□□ 0.29
HIST1H3AP68431 AC006058.3-201ENST00000606217 1069 ntBASIC16.85■□□□□ 0.29
HIST1H3AP68431 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 AL161938.1-201ENST00000569833 2180 ntBASIC16.85■□□□□ 0.29
HIST1H3AP68431 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H3AP68431 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HIST1H3AP68431 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms