Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H6P61129 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H6P61129 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 PVRIG2P-201ENST00000435460 978 ntBASIC25.83■■□□□ 1.73
ZC3H6P61129 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC25.83■■□□□ 1.73
ZC3H6P61129 UNC93B7-201ENST00000509439 705 ntBASIC25.83■■□□□ 1.73
ZC3H6P61129 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.83■■□□□ 1.73
ZC3H6P61129 CR769767.2-201ENST00000622735 460 ntBASIC25.83■■□□□ 1.73
ZC3H6P61129 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.83■■□□□ 1.73
ZC3H6P61129 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H6P61129 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ZC3H6P61129 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.83■■□□□ 1.72
ZC3H6P61129 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.82■■□□□ 1.72
ZC3H6P61129 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ZC3H6P61129 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.82■■□□□ 1.72
ZC3H6P61129 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.82■■□□□ 1.72
ZC3H6P61129 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
ZC3H6P61129 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
ZC3H6P61129 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H6P61129 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.82■■□□□ 1.72
ZC3H6P61129 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
ZC3H6P61129 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
ZC3H6P61129 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
ZC3H6P61129 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 RASA4DP-201ENST00000460726 1199 ntBASIC25.81■■□□□ 1.72
ZC3H6P61129 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ZC3H6P61129 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ZC3H6P61129 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H6P61129 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.8■■□□□ 1.72
ZC3H6P61129 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ZC3H6P61129 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.8■■□□□ 1.72
ZC3H6P61129 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.8■■□□□ 1.72
ZC3H6P61129 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.8■■□□□ 1.72
ZC3H6P61129 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.8■■□□□ 1.72
ZC3H6P61129 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.8■■□□□ 1.72
ZC3H6P61129 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
ZC3H6P61129 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.8■■□□□ 1.72
ZC3H6P61129 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
ZC3H6P61129 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
ZC3H6P61129 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
ZC3H6P61129 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H6P61129 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.79■■□□□ 1.72
ZC3H6P61129 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC25.79■■□□□ 1.72
ZC3H6P61129 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3H6P61129 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC25.79■■□□□ 1.72
ZC3H6P61129 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC25.79■■□□□ 1.72
ZC3H6P61129 MIR3180-1-201ENST00000580374 94 ntBASIC25.79■■□□□ 1.72
ZC3H6P61129 MIR3180-3-201ENST00000584616 94 ntBASIC25.79■■□□□ 1.72
ZC3H6P61129 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ZC3H6P61129 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3H6P61129 AC016734.2-201ENST00000624325 1377 ntBASIC25.79■■□□□ 1.72
ZC3H6P61129 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H6P61129 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC25.79■■□□□ 1.72
ZC3H6P61129 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H6P61129 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H6P61129 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
ZC3H6P61129 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC25.78■■□□□ 1.72
ZC3H6P61129 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.78■■□□□ 1.72
ZC3H6P61129 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H6P61129 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H6P61129 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.77■■□□□ 1.72
ZC3H6P61129 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.77■■□□□ 1.72
ZC3H6P61129 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 TSSC2-201ENST00000450217 709 ntBASIC25.77■■□□□ 1.72
ZC3H6P61129 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
ZC3H6P61129 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.77■■□□□ 1.72
ZC3H6P61129 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.77■■□□□ 1.72
ZC3H6P61129 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.77■■□□□ 1.72
ZC3H6P61129 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H6P61129 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms