Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TSPY14P-201ENST00000303979 915 ntBASIC19.04■□□□□ 0.64
SRP54P61011 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.04■□□□□ 0.64
SRP54P61011 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 AC005521.1-201ENST00000393351 872 ntBASIC19.04■□□□□ 0.64
SRP54P61011 AC113347.1-201ENST00000413321 391 ntBASIC19.04■□□□□ 0.64
SRP54P61011 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.04■□□□□ 0.64
SRP54P61011 EGLN1P1-201ENST00000531623 762 ntBASIC19.04■□□□□ 0.64
SRP54P61011 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.04■□□□□ 0.64
SRP54P61011 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.04■□□□□ 0.64
SRP54P61011 AC092865.7-201ENST00000641832 219 ntBASIC19.04■□□□□ 0.64
SRP54P61011 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SRP54P61011 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.03■□□□□ 0.64
SRP54P61011 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SRP54P61011 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
SRP54P61011 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.03■□□□□ 0.64
SRP54P61011 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SRP54P61011 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRP54P61011 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.03■□□□□ 0.64
SRP54P61011 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 TCF3P1-201ENST00000423021 1937 ntBASIC19.02■□□□□ 0.64
SRP54P61011 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.02■□□□□ 0.64
SRP54P61011 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.02■□□□□ 0.64
SRP54P61011 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRP54P61011 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.02■□□□□ 0.64
SRP54P61011 SLC25A3P1-201ENST00000443844 931 ntBASIC19.02■□□□□ 0.64
SRP54P61011 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.02■□□□□ 0.64
SRP54P61011 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.02■□□□□ 0.64
SRP54P61011 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.02■□□□□ 0.64
SRP54P61011 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.02■□□□□ 0.64
SRP54P61011 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.02■□□□□ 0.64
SRP54P61011 AC096733.2-201ENST00000609937 1394 ntBASIC19.02■□□□□ 0.64
SRP54P61011 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SRP54P61011 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SRP54P61011 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SRP54P61011 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 AL137013.1-201ENST00000432946 1228 ntBASIC19.01■□□□□ 0.63
SRP54P61011 AC128688.1-201ENST00000487626 519 ntBASIC19.01■□□□□ 0.63
SRP54P61011 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.01■□□□□ 0.63
SRP54P61011 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.01■□□□□ 0.63
SRP54P61011 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.01■□□□□ 0.63
SRP54P61011 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRP54P61011 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19■□□□□ 0.63
SRP54P61011 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SRP54P61011 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SRP54P61011 TERF1P1-201ENST00000311003 1181 ntBASIC19■□□□□ 0.63
SRP54P61011 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SRP54P61011 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 ECEL1P2-202ENST00000465689 757 ntBASIC19■□□□□ 0.63
SRP54P61011 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19■□□□□ 0.63
SRP54P61011 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19■□□□□ 0.63
SRP54P61011 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19■□□□□ 0.63
SRP54P61011 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19■□□□□ 0.63
SRP54P61011 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19■□□□□ 0.63
SRP54P61011 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRP54P61011 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms